STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_B03g068504C3H1-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (878 aa)    
Predicted Functional Partners:
Ahy_B01g055924
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.999
Ahy_A01g000802
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.999
Ahy_B01g054797
WD_REPEATS_REGION domain-containing protein.
   
    0.895
Ahy_A01g001990
WD_REPEATS_REGION domain-containing protein.
   
    0.895
Ahy_B04g069253
WD_REPEATS_REGION domain-containing protein.
   
    0.886
Ahy_A04g021398
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
    0.886
Ahy_A08g037823
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
  
  
 0.860
Ahy_A06g026779
Uncharacterized protein.
   
  0.860
Ahy_A06g026807
tRNA_int_end_N2 domain-containing protein.
   
    0.841
Ahy_B06g082704
WD_REPEATS_REGION domain-containing protein.
   
    0.833
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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