STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_B01g056530Str_synth domain-containing protein. (333 aa)    
Predicted Functional Partners:
Ahy_B07g088718
Uncharacterized protein.
  
  
 0.819
Ahy_B10g100357
Uncharacterized protein.
  
 
 0.791
Ahy_B02g060722
RNB domain-containing protein.
  
 
 0.791
Ahy_A08g038289
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
  
 
 0.791
Ahy_A07g033646
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
  
 
 0.791
Ahy_A02g007314
RNB domain-containing protein.
  
 
 0.791
Ahy_A01g003836
Uncharacterized protein.
  
 
 0.791
Ahy_B10g106133
HRDC domain-containing protein.
   
 
 0.763
Ahy_B06g084041
HRDC domain-containing protein.
   
 
 0.763
Ahy_B03g067134
HRDC domain-containing protein.
   
 
 0.763
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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