STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_A09g044798ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (626 aa)    
Predicted Functional Partners:
Ahy_B05g075275
Uncharacterized protein.
  
 0.952
Ahy_A05g022891
Uncharacterized protein.
  
 0.952
Ahy_A05g023615
RECA_2 domain-containing protein.
  
 0.931
Ahy_B05g076305
DUF1767 domain-containing protein.
    
 0.926
Ahy_A05g022284
DUF1767 domain-containing protein.
    
 0.926
Ahy_B04g069169
Uncharacterized protein.
  
 0.925
Ahy_A01g003952
Uncharacterized protein.
  
 0.918
Ahy_A06g029992
XPGN domain-containing protein.
  
 0.911
Ahy_B04g069069
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.907
Ahy_A07g035635
ERCC4 domain-containing protein.
   
 0.907
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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