Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_A08g038749AAA domain-containing protein. (703 aa)    
Predicted Functional Partners:
Ahy_A04g018673
AAA_lid_3 domain-containing protein.
  
 
 0.801
Ahy_B08g094235
zf-Tim10_DDP domain-containing protein.
    
 0.786
Ahy_A08g039124
zf-Tim10_DDP domain-containing protein.
    
 0.786
Ahy_B07g087759
AAA_lid_3 domain-containing protein.
  
 
 0.783
Ahy_B03g068385
zf-Tim10_DDP domain-containing protein.
    
 0.779
Ahy_B02g060680
zf-Tim10_DDP domain-containing protein.
    
 0.779
Ahy_A04g017151
zf-Tim10_DDP domain-containing protein.
    
 0.779
Ahy_B05g079142
AAA_lid_3 domain-containing protein.
  
 
 0.775
Ahy_A01g001975
Uncharacterized protein.
    
 0.766
Ahy_B05g079355
AAA_lid_3 domain-containing protein.
  
 
 0.760
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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