STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahy_A06g027202Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (872 aa)    
Predicted Functional Partners:
Ahy_B09g099750
Uncharacterized protein.
   
0.987
Ahy_A09g041941
Uncharacterized protein.
   
0.987
Ahy_B03g067491
WD_REPEATS_REGION domain-containing protein.
   
 0.975
Ahy_A03g016018
WD_REPEATS_REGION domain-containing protein.
   
 0.975
Ahy_B03g068661
Uncharacterized protein.
   
 0.974
Ahy_A03g017040
Uncharacterized protein.
   
0.974
Ahy_B06g080897
Uncharacterized protein.
   
0.973
Ahy_B01g052265
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.969
Ahy_A01g004685
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.969
Ahy_B01g053707
Protein transport protein sec16.
   
 0.927
Your Current Organism:
Arachis hypogaea
NCBI taxonomy Id: 3818
Other names: A. hypogaea, Arachis hypogaea L., goober, ground-nut, peanut
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