Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIL98059.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)    
Predicted Functional Partners:
AIL99305.1
Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
AIL98057.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.753
AIL98058.1
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
AIL98423.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.654
AIL99823.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.629
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 0.561
AIL98056.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.536
AIM00892.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.531
AIL97905.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
 
 
 0.499
AIL98280.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.491
Your Current Organism:
Sinorhizobium meliloti
NCBI taxonomy Id: 382
Other names: ATCC 9930, CCUG 27879, CFBP 5561, DSM 30135, Ensifer meliloti, Ensifer sp. AC50a, Ensifer sp. AC50e, HAMBI 2148, IAM 12611, ICMP 12623, IFO 14782, JCM 20682, LMG 6133, LMG:6133, NBRC 14782, NCAIM B.01520, NRRL L-45, NZP 4027, Rhizobium meliloti, Rhizobium meliloti (megaplasmid pRME41B SYM), Rhizobium meliloti (plasmid pRmeGR4b), Rhizobium meliloti plasmid pRmeGR4b, Rhizobium sp. AC50e, S. meliloti
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