Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL98073.1 | AIL98074.1 | DU99_01195 | DU99_01200 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
AIL98073.1 | AIL98076.1 | DU99_01195 | DU99_01210 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
AIL98073.1 | recR | DU99_01195 | DU99_01205 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.959 |
AIL98074.1 | AIL98073.1 | DU99_01200 | DU99_01195 | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.561 |
AIL98074.1 | AIL98076.1 | DU99_01200 | DU99_01210 | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
AIL98074.1 | recR | DU99_01200 | DU99_01205 | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.613 |
AIL98076.1 | AIL98073.1 | DU99_01210 | DU99_01195 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.426 |
AIL98076.1 | AIL98074.1 | DU99_01210 | DU99_01200 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
AIL98076.1 | AIM00264.1 | DU99_01210 | DU99_12945 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
AIL98076.1 | recR | DU99_01210 | DU99_01205 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.676 |
AIL98076.1 | rutR | DU99_01210 | DU99_13660 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |
AIM00264.1 | AIL98076.1 | DU99_12945 | DU99_01210 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
recR | AIL98073.1 | DU99_01205 | DU99_01195 | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.959 |
recR | AIL98074.1 | DU99_01205 | DU99_01200 | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.613 |
recR | AIL98076.1 | DU99_01205 | DU99_01210 | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.676 |
rutR | AIL98076.1 | DU99_13660 | DU99_01210 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.487 |