Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL98168.1 | AIL98169.1 | DU99_01700 | DU99_01705 | 5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
AIL98168.1 | AIL98170.1 | DU99_01700 | DU99_01710 | 5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.536 |
AIL98168.1 | guaA | DU99_01700 | DU99_01695 | 5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.676 |
AIL98169.1 | AIL98168.1 | DU99_01705 | DU99_01700 | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
AIL98169.1 | AIL98170.1 | DU99_01705 | DU99_01710 | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
AIL98169.1 | guaA | DU99_01705 | DU99_01695 | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.604 |
AIL98170.1 | AIL98168.1 | DU99_01710 | DU99_01700 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.536 |
AIL98170.1 | AIL98169.1 | DU99_01710 | DU99_01705 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
AIL98170.1 | AIL98744.1 | DU99_01710 | DU99_04740 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
AIL98170.1 | guaA | DU99_01710 | DU99_01695 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.412 |
AIL98170.1 | kdsB | DU99_01710 | DU99_01150 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.622 |
AIL98744.1 | AIL98170.1 | DU99_04740 | DU99_01710 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.440 |
guaA | AIL98168.1 | DU99_01695 | DU99_01700 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 5'-methylthioadenosine nucleosidase; Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.676 |
guaA | AIL98169.1 | DU99_01695 | DU99_01705 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.604 |
guaA | AIL98170.1 | DU99_01695 | DU99_01710 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
kdsB | AIL98170.1 | DU99_01150 | DU99_01710 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |