STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_044763Vacuolar protein sorting-associated protein 36. (92 aa)    
Predicted Functional Partners:
KK1_023365
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.984
KK1_023492
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.982
KK1_030921
Vacuolar protein sorting-associated protein 20 isogeny 2.
    
 0.965
KK1_039016
Protein ELC.
    
 0.938
KK1_017034
40S ribosomal protein S27a.
    
 0.882
KK1_012436
40S ribosomal protein S27a.
    
 0.882
KK1_033094
Ubiquitin.
    
 0.852
KK1_043055
Ubiquitin.
    
 0.852
KK1_022219
Vacuolar protein sorting-associated protein 24 isogeny 1.
     
 0.805
KK1_014389
Vacuolar protein-sorting-associated protein 37 isogeny 1.
     
 0.793
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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