KK1_042577 protein (Cajanus cajan) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KK1_042577

E3 ubiquitin-protein ligase UPL6. (59 aa)

Predicted Functional Partners:

KK1_034611

0.770

KK1_034438

0.756

KK1_021943

0.756

KK1_006952

0.675

KK1_014221

0.576

KK1_004500

0.542

KK1_039926

0.538

KK1_005545

0.528

KK1_021578

0.517

KK1_017107

0.508

Your Current Organism:

Cajanus cajan

NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KK1_004500	KK1_005545	A0A151STU2	A0A151U0X3	NEDD8-activating enzyme E1 catalytic subunit.	RING finger protein 160 family.	0.627
KK1_004500	KK1_006952	A0A151STU2	A0A151U4R9	NEDD8-activating enzyme E1 catalytic subunit.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.874
KK1_004500	KK1_021578	A0A151STU2	A0A151TLM8	NEDD8-activating enzyme E1 catalytic subunit.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.909
KK1_004500	KK1_021943	A0A151STU2	A0A151TMN3	NEDD8-activating enzyme E1 catalytic subunit.	E3 ubiquitin-protein ligase UPL3.	0.899
KK1_004500	KK1_034438	A0A151STU2	A0A151RND1	NEDD8-activating enzyme E1 catalytic subunit.	E3 ubiquitin-protein ligase UPL3.	0.899
KK1_004500	KK1_034611	A0A151STU2	A0A151RMZ7	NEDD8-activating enzyme E1 catalytic subunit.	E3 ubiquitin-protein ligase UPL4.	0.900
KK1_004500	KK1_042577	A0A151STU2	A0A151R172	NEDD8-activating enzyme E1 catalytic subunit.	E3 ubiquitin-protein ligase UPL6.	0.542
KK1_005545	KK1_004500	A0A151U0X3	A0A151STU2	RING finger protein 160 family.	NEDD8-activating enzyme E1 catalytic subunit.	0.627
KK1_005545	KK1_006952	A0A151U0X3	A0A151U4R9	RING finger protein 160 family.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.908
KK1_005545	KK1_021578	A0A151U0X3	A0A151TLM8	RING finger protein 160 family.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.627
KK1_005545	KK1_021943	A0A151U0X3	A0A151TMN3	RING finger protein 160 family.	E3 ubiquitin-protein ligase UPL3.	0.837
KK1_005545	KK1_034438	A0A151U0X3	A0A151RND1	RING finger protein 160 family.	E3 ubiquitin-protein ligase UPL3.	0.837
KK1_005545	KK1_034611	A0A151U0X3	A0A151RMZ7	RING finger protein 160 family.	E3 ubiquitin-protein ligase UPL4.	0.837
KK1_005545	KK1_042577	A0A151U0X3	A0A151R172	RING finger protein 160 family.	E3 ubiquitin-protein ligase UPL6.	0.528
KK1_006952	KK1_004500	A0A151U4R9	A0A151STU2	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	NEDD8-activating enzyme E1 catalytic subunit.	0.874
KK1_006952	KK1_005545	A0A151U4R9	A0A151U0X3	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	RING finger protein 160 family.	0.908
KK1_006952	KK1_021578	A0A151U4R9	A0A151TLM8	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.874
KK1_006952	KK1_021943	A0A151U4R9	A0A151TMN3	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	E3 ubiquitin-protein ligase UPL3.	0.999
KK1_006952	KK1_034438	A0A151U4R9	A0A151RND1	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	E3 ubiquitin-protein ligase UPL3.	0.999
KK1_006952	KK1_034611	A0A151U4R9	A0A151RMZ7	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	E3 ubiquitin-protein ligase UPL4.	0.999