STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_041924Transcriptional repressor NF-X1. (980 aa)    
Predicted Functional Partners:
KK1_017613
Peptidylprolyl isomerase.
    
 
 0.788
KK1_038518
40S ribosomal protein S19-1.
    
   0.569
KK1_022785
40S ribosomal protein S19-1.
    
   0.569
KK1_003324
60S ribosomal protein L4-1.
    
   0.553
KK1_005977
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
    0.530
KK1_024091
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
   0.524
KK1_010196
60S ribosomal protein L24.
    
   0.524
KK1_010907
60S ribosomal protein L21-1.
    
   0.524
KK1_007692
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.524
KK1_046578
60S ribosomal protein L39.
    
   0.514
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.