STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_041905PCI domain-containing protein 2. (413 aa)    
Predicted Functional Partners:
KK1_004962
Putative 26S proteasome complex subunit sem1-1.
    
 
 0.962
KK1_031291
Leukocyte receptor cluster member 8 isogeny.
   
 
 0.951
KK1_005339
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.946
KK1_036984
80 kDa MCM3-associated protein.
   
 
 0.944
KK1_005389
80 kDa MCM3-associated protein.
   
 
 0.944
KK1_038758
Caltractin.
    
 
 0.658
KK1_037132
Centrin-2.
    
 
 0.658
KK1_034342
Caltractin.
    
 
 0.658
KK1_034225
Caltractin.
    
 
 0.658
KK1_027888
Centrin-2.
    
 
 0.658
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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