STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_040394Putative CCR4-associated factor 1 isogeny 7. (232 aa)    
Predicted Functional Partners:
KK1_020926
CCR4-NOT transcription complex subunit 1.
   
 0.908
KK1_014007
Uncharacterized protein.
   
 0.846
KK1_022065
CCR4-NOT transcription complex subunit 2.
   
 0.846
KK1_037838
CCR4-NOT transcription complex subunit 3.
    
 0.836
KK1_018354
CCR4-NOT transcription complex subunit 3.
    
 0.836
KK1_039733
CCR4-NOT transcription complex subunit 4.
    
 0.799
KK1_003323
CCR4-NOT transcription complex subunit 4.
    
 0.799
KK1_022084
CCR4-NOT transcription complex subunit 4.
    
 0.799
KK1_033504
CCR4-NOT transcription complex subunit 10.
    
 0.794
KK1_025926
Cell differentiation protein RCD1 isogeny.
   
 0.791
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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