STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_040022Retrovirus-related Pol polyprotein from transposon TNT 1-94. (225 aa)    
Predicted Functional Partners:
KK1_001039
Copia protein.
  
     0.497
KK1_041815
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.467
KK1_005200
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.457
KK1_000760
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.441
KK1_032957
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.439
KK1_033655
Copia protein.
  
     0.438
KK1_050630
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.434
KK1_010635
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.432
KK1_046731
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.425
KK1_020991
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.421
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.