STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_039149Squamosa promoter-binding-like protein. (142 aa)    
Predicted Functional Partners:
KK1_009827
DNA polymerase delta small subunit.
    
 0.609
KK1_037583
Crossover junction endonuclease MUS81.
    
 0.541
KK1_043299
C2H2-type domain-containing protein.
  
     0.539
KK1_043298
C2H2-type domain-containing protein.
  
     0.539
KK1_007647
Uncharacterized protein.
  
     0.537
KK1_050364
Lupeol synthase 2.
  
 
   0.536
KK1_049481
Uncharacterized protein.
  
 
   0.515
KK1_000232
CUE domain-containing protein.
  
     0.515
KK1_003042
CUE domain-containing protein.
  
     0.513
KK1_029744
B3 domain-containing protein At2g36080 family.
  
     0.505
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.