STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_038893HABP4_PAI-RBP1 domain-containing protein. (371 aa)    
Predicted Functional Partners:
KK1_003324
60S ribosomal protein L4-1.
   
 
 0.967
KK1_010907
60S ribosomal protein L21-1.
   
 
 0.922
KK1_010196
60S ribosomal protein L24.
   
 
 0.912
KK1_007692
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
   0.912
KK1_024091
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
   0.904
KK1_046578
60S ribosomal protein L39.
   
   0.899
KK1_002245
Ribosomal RNA large subunit methyltransferase I.
   
 
 0.890
KK1_023814
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.890
KK1_013488
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.883
KK1_036850
60S ribosomal protein L31.
   
 
 0.870
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
Server load: low (40%) [HD]