STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_038759Ubiquitin thioesterase. (269 aa)    
Predicted Functional Partners:
KK1_017034
40S ribosomal protein S27a.
    
 
 0.885
KK1_012436
40S ribosomal protein S27a.
    
 
 0.885
KK1_033094
Ubiquitin.
    
   0.881
KK1_043055
Ubiquitin.
    
   0.881
KK1_040570
Ubiquitin-conjugating enzyme E2 10; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.811
KK1_033825
Vacuolar protein sorting-associated protein 25.
    
 0.811
KK1_033599
Vacuolar protein sorting-associated protein 25.
    
 0.811
KK1_026804
Ubiquitin carrier protein E2 36; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.811
KK1_000618
Vacuolar protein sorting-associated protein 25.
    
 0.811
KK1_000606
Vacuolar protein sorting-associated protein 25.
    
 0.811
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.