STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_038023Polyadenylate-binding protein, cytoplasmic and nuclear. (73 aa)    
Predicted Functional Partners:
KK1_011536
Nucleolar protein 56.
   
 
 0.691
KK1_014064
Pin2-interacting protein X1.
   
 
 0.577
KK1_021889
Putative nucleolar protein 5-2.
   
 
 0.531
KK1_029475
rRNA 2'-O-methyltransferase fibrillarin 2.
   
 
 0.529
KK1_009985
rRNA 2'-O-methyltransferase fibrillarin 2.
   
 
 0.529
KK1_028411
Something about silencing protein 10.
   
  
 0.496
KK1_009476
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
  
 0.495
KK1_022129
Nucleolar complex protein 3 isogeny.
   
    0.454
KK1_017712
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.446
KK1_011312
Pumilio domain-containing protein C14orf21 isogeny.
   
 
 0.437
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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