STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_037333MADS-box transcription factor 3. (61 aa)    
Predicted Functional Partners:
KK1_035063
Ethylene-responsive transcription factor RAP2-3.
   
  
 0.579
KK1_027615
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_026853
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_026785
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_024809
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_015914
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_017414
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_017695
Tubby-like F-box protein; Belongs to the TUB family.
    
 
 0.576
KK1_013087
Tubby-like F-box protein 2; Belongs to the TUB family.
    
 
 0.576
KK1_003843
WD repeat-containing protein 61.
      
 0.570
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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