STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KK1_008481Putative ribonuclease H protein At1g65750 family. (388 aa)    
Predicted Functional Partners:
KK1_031908
LINE-1 reverse transcriptase isogeny.
  
     0.486
KK1_034259
Retrovirus-related Pol polyprotein LINE-1.
  
     0.477
KK1_037314
Reverse transcriptase domain-containing protein.
  
     0.470
KK1_000793
Reverse transcriptase domain-containing protein.
  
     0.470
KK1_019220
Transposon TX1 uncharacterized.
  
     0.465
KK1_021328
Transposon TX1 uncharacterized.
  
     0.454
KK1_012739
LINE-1 reverse transcriptase isogeny.
  
     0.452
KK1_010185
Reverse transcriptase domain-containing protein.
  
     0.447
KK1_047748
Transposon TX1 uncharacterized.
  
     0.443
KK1_031561
Retrovirus-related Pol polyprotein LINE-1.
  
     0.442
Your Current Organism:
Cajanus cajan
NCBI taxonomy Id: 3821
Other names: C. cajan, Cajanus cajan (L.) Millsp., pigeon pea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.