STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81405.1Sulfatase, putative; [P] COG3119 Arylsulfatase A and related enzymes. (539 aa)    
Predicted Functional Partners:
EDY81676.1
Sulfatase domain protein; [P] COG3119 Arylsulfatase A and related enzymes.
  
     0.775
EDY82207.1
Sulfatase, putative; [P] COG3119 Arylsulfatase A and related enzymes.
  
     0.775
EDY84954.1
[S] COG1262 Uncharacterized conserved protein.
 
   0.696
EDY83017.1
[S] COG1262 Uncharacterized conserved protein.
 
   0.642
EDY82801.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
  
     0.624
EDY81044.1
[S] COG1262 Uncharacterized conserved protein.
 
   0.603
EDY81984.1
TonB family C-terminal domain protein; [R] COG0666 FOG: Ankyrin repeat.
  
 
 0.519
EDY82285.1
Nucleotidyl transferase family; [G] COG0448 ADP-glucose pyrophosphorylase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.511
EDY84635.1
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; Belongs to the glycosyl hydrolase 2 family.
  
  0.504
EDY81409.1
Hypothetical protein.
       0.487
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.