STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81642.1Transporter, MotA/TolQ/ExbB proton channel family, putative; [U] COG0811 Biopolymer transport proteins. (167 aa)    
Predicted Functional Partners:
EDY81386.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
 
   0.941
EDY84937.1
Hypothetical protein.
       0.773
EDY83809.1
ABC transporter, ATP-binding protein, putative; [R] COG1137 ABC-type (unclassified) transport system, ATPase component.
  
     0.739
EDY83043.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.720
EDY83396.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.702
EDY81741.1
[M] COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.701
EDY81619.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.692
EDY80447.1
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.649
EDY83586.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.643
EDY85080.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.628
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.