STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81643.1NAD dependent epimerase/dehydratase family; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (305 aa)    
Predicted Functional Partners:
EDY80424.1
[M] COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.986
EDY80505.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.915
EDY81855.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.734
EDY80905.1
3-beta hydroxysteroid dehydrogenase/isomerase family; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 0.734
EDY82189.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
  
 0.715
EDY80566.1
Nucleotidyl transferase superfamily; [M] COG1210 UDP-glucose pyrophosphorylase.
  
  
 0.712
EDY83365.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.712
EDY82397.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
  
 0.618
EDY82464.1
NAD dependent epimerase/dehydratase family; [M] COG1088 dTDP-D-glucose 4,6-dehydratase.
 
 0.609
EDY81196.1
Hypothetical protein; [M] COG1087 UDP-glucose 4-epimerase; NAD-binding domain 4, putative.
 
 0.593
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.