Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDY81313.1 | EDY81671.1 | VDG1235_931 | VDG1235_1289 | Ser/Thr protein phosphatase family protein. | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | 0.815 |
| EDY81313.1 | EDY82454.1 | VDG1235_931 | VDG1235_2076 | Ser/Thr protein phosphatase family protein. | [L] COG1793 ATP-dependent DNA ligase. | 0.973 |
| EDY81313.1 | EDY84221.1 | VDG1235_931 | VDG1235_3852 | Ser/Thr protein phosphatase family protein. | [L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.986 |
| EDY81313.1 | recA | VDG1235_931 | VDG1235_1679 | Ser/Thr protein phosphatase family protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.713 |
| EDY81671.1 | EDY81313.1 | VDG1235_1289 | VDG1235_931 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Ser/Thr protein phosphatase family protein. | 0.815 |
| EDY81671.1 | EDY82286.1 | VDG1235_1289 | VDG1235_1906 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Hypothetical protein; [L] COG0328 Ribonuclease HI. | 0.611 |
| EDY81671.1 | EDY82454.1 | VDG1235_1289 | VDG1235_2076 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | [L] COG1793 ATP-dependent DNA ligase. | 0.535 |
| EDY81671.1 | EDY82558.1 | VDG1235_1289 | VDG1235_2181 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Hypothetical protein. | 0.590 |
| EDY81671.1 | EDY82636.1 | VDG1235_1289 | VDG1235_2259 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Formamidopyrimidine-DNA glycosylase H2TH domain family; [L] COG0266 Formamidopyrimidine-DNA glycosylase. | 0.755 |
| EDY81671.1 | EDY83148.1 | VDG1235_1289 | VDG1235_2772 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Exonuclease superfamily. | 0.544 |
| EDY81671.1 | EDY84221.1 | VDG1235_1289 | VDG1235_3852 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | [L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.813 |
| EDY81671.1 | glyQS | VDG1235_1289 | VDG1235_2280 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.664 |
| EDY81671.1 | msrA | VDG1235_1289 | VDG1235_3751 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Peptide methionine sulfoxide reductase family; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.694 |
| EDY81671.1 | recA | VDG1235_1289 | VDG1235_1679 | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.570 |
| EDY82286.1 | EDY81671.1 | VDG1235_1906 | VDG1235_1289 | Hypothetical protein; [L] COG0328 Ribonuclease HI. | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | 0.611 |
| EDY82286.1 | EDY83148.1 | VDG1235_1906 | VDG1235_2772 | Hypothetical protein; [L] COG0328 Ribonuclease HI. | Exonuclease superfamily. | 0.572 |
| EDY82286.1 | EDY84221.1 | VDG1235_1906 | VDG1235_3852 | Hypothetical protein; [L] COG0328 Ribonuclease HI. | [L] COG0258 5'-3' exonuclease (including N-terminal domain of PolI). | 0.632 |
| EDY82454.1 | EDY81313.1 | VDG1235_2076 | VDG1235_931 | [L] COG1793 ATP-dependent DNA ligase. | Ser/Thr protein phosphatase family protein. | 0.973 |
| EDY82454.1 | EDY81671.1 | VDG1235_2076 | VDG1235_1289 | [L] COG1793 ATP-dependent DNA ligase. | [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains. | 0.535 |
| EDY82454.1 | EDY82636.1 | VDG1235_2076 | VDG1235_2259 | [L] COG1793 ATP-dependent DNA ligase. | Formamidopyrimidine-DNA glycosylase H2TH domain family; [L] COG0266 Formamidopyrimidine-DNA glycosylase. | 0.478 |
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