STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81726.1Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins. (352 aa)    
Predicted Functional Partners:
EDY84088.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
  
     0.757
EDY80741.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
  
     0.669
EDY81803.1
DegT/DnrJ/EryC1/StrS aminotransferase family; [R] COG0319 Predicted metal-dependent hydrolase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.667
EDY83815.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
  
     0.663
EDY81109.1
Shikimate kinase; [R] COG1079 Uncharacterized ABC-type transport system, permease component.
 
   
  0.624
EDY82308.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
  
     0.555
EDY81871.1
DegT/DnrJ/EryC1/StrS aminotransferase family; [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.540
EDY84771.1
AP endonuclease, family 2; [G] COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.526
EDY80909.1
Hypothetical protein; [P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
       0.510
EDY80779.1
AP endonuclease, family 2; [G] COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.489
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.