STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81980.1ABC transporter, permease protein; [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (305 aa)    
Predicted Functional Partners:
EDY84369.1
ABC transporter, permease protein; [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.998
EDY82109.1
Bacterial extracellular solute-binding protein, family 5; [E] COG4166 ABC-type oligopeptide transport system, periplasmic component.
 
 0.987
EDY82951.1
Bacterial extracellular solute-binding protein, family 5; [E] COG4166 ABC-type oligopeptide transport system, periplasmic component.
 
 0.987
EDY84656.1
Oligopeptide/dipeptide transporter domain family protein; [R] COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
 0.986
EDY84558.1
Oligopeptide/dipeptide transporter domain family protein; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.983
EDY82693.1
ABC transporter, ATP-binding protein; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
 0.977
EDY83843.1
ABC transporter, permease protein, putative; [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.975
EDY84056.1
Oligopeptide/dipeptide transporter domain family protein; [E] COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.948
EDY81014.1
Bacterial extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
 0.938
EDY82152.1
[R] COG4239 ABC-type uncharacterized transport system, permease component.
  
 0.909
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.