STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82017.1Glycosyl hydrolase family 26; [G] COG4124 Beta-mannanase; Belongs to the glycosyl hydrolase 26 family. (405 aa)    
Predicted Functional Partners:
EDY82627.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.802
EDY81827.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.786
EDY83271.1
Conserved domain protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
     0.762
EDY83996.1
GDSL-like lipase/acylhydrolase domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.761
EDY82616.1
N-acylglucosamine 2-epimerase superfamily; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
     0.758
EDY81203.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.744
EDY84735.1
Hypothetical protein; [G] COG2942 N-acyl-D-glucosamine 2-epimerase.
 
     0.735
EDY84973.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.727
EDY85166.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.633
EDY85210.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.631
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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