STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80559.1Putative PEP-CTERM system response regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (444 aa)    
Predicted Functional Partners:
EDY84334.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.874
EDY80449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
  
 0.864
EDY80787.1
PAS fold family; [T] COG2202 FOG: PAS/PAC domain.
  
 0.838
EDY84714.1
Hypothetical protein; [T] COG0784 FOG: CheY-like receiver; response regulator receiver domain, putative.
  
 0.836
EDY81281.1
PAS fold family; [T] COG2202 FOG: PAS/PAC domain.
  
 0.833
EDY82346.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
  
 0.832
EDY84912.1
[K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.
 
  
 0.832
EDY82710.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
 0.827
EDY81023.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.814
EDY80426.1
PAS fold family; [T] COG2202 FOG: PAS/PAC domain.
 
 0.805
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.