STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82206.1[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance. (235 aa)    
Predicted Functional Partners:
EDY82045.1
CBS domain pair protein; [R] COG1253 Hemolysins and related proteins containing CBS domains.
 
    0.893
EDY81299.1
Hypothetical protein.
       0.628
EDY84571.1
Signal peptide peptidase SppA, 67K type; [OU] COG0616 Periplasmic serine proteases (ClpP class).
 
    0.580
EDY84339.1
Hypothetical protein.
       0.572
EDY84807.1
Hypothetical protein.
       0.522
EDY81686.1
Toxic anion resistance protein (TelA); [P] COG3853 Uncharacterized protein involved in tellurite resistance.
  
    0.411
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.