STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82302.1Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins. (170 aa)    
Predicted Functional Partners:
EDY83462.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.722
EDY83289.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.688
EDY82649.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.686
EDY81111.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
 
   0.665
EDY82086.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.659
EDY81404.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.655
EDY83164.1
Transcriptional regulator, AraC family protein; [K] COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.655
EDY82312.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.654
EDY83761.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.648
EDY85043.1
Transcriptional regulator, AraC family protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
  0.643
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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