STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82407.1AMP-binding enzyme, putative; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (540 aa)    
Predicted Functional Partners:
EDY82064.1
AMP-binding enzyme domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
0.993
EDY82007.1
Hydrolase, alpha/beta fold family, putative; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
 
  0.984
EDY83629.1
ExsB family; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
0.974
EDY83313.1
[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
  
 0.899
EDY82461.1
Hypothetical protein.
 
 0.883
EDY80905.1
3-beta hydroxysteroid dehydrogenase/isomerase family; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
  0.827
EDY84546.1
Hypothetical protein.
    
 
 0.820
EDY80449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
     
 0.759
EDY82977.1
[I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.741
EDY80844.1
[I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.741
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.