STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82599.1Hypothetical protein; [MU] COG3468 Type V secretory pathway, adhesin AidA. (341 aa)    
Predicted Functional Partners:
guaA
GMP synthase, C-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.729
EDY81749.1
Competence/damage-inducible protein CinA N-terminal domain, putative; [R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
  0.726
EDY81385.1
Peptidase families S8 and S53 domain protein; [O] COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
 
 0.723
EDY80851.1
[F] COG0516 IMP dehydrogenase/GMP reductase.
    
  0.708
EDY84137.1
Hypothetical protein.
   
 0.623
EDY83630.1
Surface antigen variable number repeat domain protein; [U] COG2831 Hemolysin activation/secretion protein.
  
 0.586
EDY82978.1
Hypothetical protein.
  
  0.513
EDY83876.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  0.513
EDY82466.1
Glycosyl hydrolase family 10 protein; [G] COG3693 Beta-1,4-xylanase.
    
 0.498
EDY83284.1
Glycosyl hydrolase family 10 protein; [G] COG3693 Beta-1,4-xylanase.
    
 0.498
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.