STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80609.1TonB family C-terminal domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (217 aa)    
Predicted Functional Partners:
EDY80579.1
Transporter, MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
 
   0.806
EDY85090.1
TonB-dependent receptor subfamily; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.788
EDY83744.1
Transporter, MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
  
   0.758
EDY81159.1
Transporter, MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
  
   0.745
EDY81427.1
Transporter, MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
  
   0.742
EDY83509.1
Transporter, MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
  
   0.713
EDY84683.1
Transporter, MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
  
   0.708
EDY81596.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.701
EDY81026.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
   0.695
EDY83252.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
   0.693
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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