STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82625.1HicB family; [S] COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters. (111 aa)    
Predicted Functional Partners:
EDY82582.1
[S] COG3744 Uncharacterized protein conserved in bacteria; PIN domain, putative.
  
     0.642
EDY83378.1
Hypothetical protein.
       0.588
EDY84414.1
Hypothetical protein.
       0.550
EDY83104.1
Hypothetical protein.
       0.503
EDY81080.1
Addiction module antitoxin, Axe family; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.452
EDY82187.1
Hypothetical protein.
       0.434
EDY84268.1
Addiction module toxin, RelE/StbE family; [JD] COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system.
 
     0.429
EDY83482.1
Helicase conserved C-terminal domain protein; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
 
     0.405
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.