STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY82923.1[E] COG0405 Gamma-glutamyltransferase. (573 aa)    
Predicted Functional Partners:
EDY82766.1
[E] COG0069 Glutamate synthase domain 2.
     
 0.916
EDY84130.1
[E] COG0069 Glutamate synthase domain 2.
     
 0.916
EDY82884.1
Hydantoinase/oxoprolinase domain family protein; [EQ] COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit.
    
 0.813
EDY82643.1
Renal dipeptidase superfamily; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
 
  
 0.804
EDY80889.1
Aldehyde dehydrogenase (NAD) family protein; [E] COG0506 Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.779
EDY80437.1
Urea carboxylase; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
   
 
 0.755
EDY80708.1
Aldehyde dehydrogenase (NAD) family protein; [C] COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
 
 0.745
glsA
[E] COG2066 Glutaminase; Belongs to the glutaminase family.
   
 
 0.743
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.740
EDY84224.1
Glutamine synthetase, catalytic domain; [E] COG0174 Glutamine synthetase.
     
 0.731
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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