STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83056.1Glycosyl hydrolases family 35; [G] COG1874 Beta-galactosidase. (614 aa)    
Predicted Functional Partners:
EDY81654.1
Hypothetical protein.
      0.961
EDY84343.1
FG-GAP repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.813
EDY83400.1
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; [G] COG3250 Beta-galactosidase/beta-glucuronidase.
  
 
  0.781
EDY84969.1
Melibiase subfamily, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
  0.765
EDY81438.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
  0.748
EDY83585.1
Carbohydrate binding module (family 6); [R] COG3979 Uncharacterized protein contain chitin-binding domain type 3.
 
     0.748
EDY82380.1
Glycosyl hydrolases family 35; [G] COG1874 Beta-galactosidase.
  
  
 
0.707
EDY84016.1
Glycosyl hydrolases family 2, sugar binding domain protein; [G] COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.695
EDY84733.1
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; [G] COG3250 Beta-galactosidase/beta-glucuronidase.
  
 
  0.616
EDY85156.1
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; [G] COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.614
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.