STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83089.1Hypothetical protein; [V] COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases. (198 aa)    
Predicted Functional Partners:
EDY82802.1
Hypothetical protein; [V] COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
     0.985
EDY81511.1
Hypothetical protein.
       0.773
EDY83468.1
IS66 Orf2 like protein; [L] COG3436 Transposase and inactivated derivatives.
  
    0.643
EDY82197.1
Divergent AAA domain family; [K] COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
  
    0.579
EDY85008.1
Divergent AAA domain family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.579
EDY84010.1
Hypothetical protein.
       0.552
EDY81687.1
Transposase IS66 family; [L] COG3436 Transposase and inactivated derivatives.
  
    0.538
EDY83819.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
    0.505
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.