Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDY80760.1 | EDY82925.1 | VDG1235_377 | VDG1235_2548 | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.999 |
| EDY80760.1 | EDY83580.1 | VDG1235_377 | VDG1235_3207 | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | Hypothetical protein; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | 0.997 |
| EDY80760.1 | nadD | VDG1235_377 | VDG1235_1860 | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.726 |
| EDY80760.1 | nadE | VDG1235_377 | VDG1235_3489 | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | NAD synthase family; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.743 |
| EDY80760.1 | nadK | VDG1235_377 | VDG1235_2746 | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | NAD(+)/NADH kinase, putative; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.868 |
| EDY80853.1 | EDY82141.1 | VDG1235_470 | VDG1235_1761 | Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF. | Hemolysin A; [J] COG1189 Predicted rRNA methylase. | 0.583 |
| EDY80853.1 | EDY83715.1 | VDG1235_470 | VDG1235_3342 | Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF. | Riboflavin biosynthesis protein RibF; [H] COG0196 FAD synthase; Belongs to the ribF family. | 0.598 |
| EDY80853.1 | nadK | VDG1235_470 | VDG1235_2746 | Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF. | NAD(+)/NADH kinase, putative; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.746 |
| EDY82141.1 | EDY80853.1 | VDG1235_1761 | VDG1235_470 | Hemolysin A; [J] COG1189 Predicted rRNA methylase. | Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF. | 0.583 |
| EDY82141.1 | EDY83715.1 | VDG1235_1761 | VDG1235_3342 | Hemolysin A; [J] COG1189 Predicted rRNA methylase. | Riboflavin biosynthesis protein RibF; [H] COG0196 FAD synthase; Belongs to the ribF family. | 0.828 |
| EDY82141.1 | dxs | VDG1235_1761 | VDG1235_1516 | Hemolysin A; [J] COG1189 Predicted rRNA methylase. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.528 |
| EDY82141.1 | nadK | VDG1235_1761 | VDG1235_2746 | Hemolysin A; [J] COG1189 Predicted rRNA methylase. | NAD(+)/NADH kinase, putative; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.827 |
| EDY82925.1 | EDY80760.1 | VDG1235_2548 | VDG1235_377 | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | 0.999 |
| EDY82925.1 | EDY83580.1 | VDG1235_2548 | VDG1235_3207 | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Hypothetical protein; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | 0.999 |
| EDY82925.1 | EDY83961.1 | VDG1235_2548 | VDG1235_3588 | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | MazG family protein; [R] COG1694 Predicted pyrophosphatase. | 0.492 |
| EDY82925.1 | nadD | VDG1235_2548 | VDG1235_1860 | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.721 |
| EDY82925.1 | nadE | VDG1235_2548 | VDG1235_3489 | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD synthase family; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.833 |
| EDY82925.1 | nadK | VDG1235_2548 | VDG1235_2746 | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD(+)/NADH kinase, putative; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.865 |
| EDY83580.1 | EDY80760.1 | VDG1235_3207 | VDG1235_377 | Hypothetical protein; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | Alanine dehydrogenase/PNT, N-terminal domain family; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | 0.997 |
| EDY83580.1 | EDY82925.1 | VDG1235_3207 | VDG1235_2548 | Hypothetical protein; [C] COG3288 NAD/NADP transhydrogenase alpha subunit. | NAD(P) transhydrogenase beta subunit superfamily; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.999 |
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