STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80669.1Conserved domain protein. (348 aa)    
Predicted Functional Partners:
EDY84331.1
[C] COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
 
  0.863
EDY84994.1
NIPSNAP family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.860
EDY80517.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; [C] COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
    
  0.831
EDY84138.1
Cytochrome c subfamily, putative; [G] COG4993 Glucose dehydrogenase.
  
  
  0.828
EDY84266.1
Putative membrane-bound dehydrogenase domain protein; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
  
  0.826
EDY84866.1
Putative membrane-bound dehydrogenase domain protein; [C] COG1413 FOG: HEAT repeat.
 
  
  0.796
EDY80895.1
Putative heme-binding domain protein; [C] COG1413 FOG: HEAT repeat.
  
  
  0.789
EDY82313.1
Hypothetical protein.
  
  
  0.788
EDY84354.1
Conserved domain protein.
  
     0.768
EDY84304.1
Copper binding protein, plastocyanin/azurin family; [C] COG3241 Azurin.
 
  
  0.763
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.