STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83426.1Ammonium transporter; [P] COG0004 Ammonia permease. (466 aa)    
Predicted Functional Partners:
EDY82058.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 0.997
EDY81898.1
[E] COG0347 Nitrogen regulatory protein PII.
 
 0.942
EDY80449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
  
 0.757
EDY81281.1
PAS fold family; [T] COG2202 FOG: PAS/PAC domain.
    
 0.740
EDY83614.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
  
 0.719
EDY82536.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
  
 0.713
EDY82766.1
[E] COG0069 Glutamate synthase domain 2.
 
  
 0.649
EDY84130.1
[E] COG0069 Glutamate synthase domain 2.
 
  
 0.635
EDY83243.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
  
 0.539
EDY84334.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.512
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.