STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83444.1[O] COG1397 ADP-ribosylglycohydrolase. (309 aa)    
Predicted Functional Partners:
EDY81154.1
NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase.
 
     0.896
EDY84331.1
[C] COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
    0.776
EDY83732.1
Flavodoxin, putative; [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein).
  
    0.630
EDY83980.1
Hypothetical protein.
       0.529
EDY81898.1
[E] COG0347 Nitrogen regulatory protein PII.
    
 
 0.473
EDY82058.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
    
 
 0.473
EDY84582.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.458
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.