Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDY80859.1 | EDY81358.1 | VDG1235_476 | VDG1235_976 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.968 |
| EDY80859.1 | EDY83525.1 | VDG1235_476 | VDG1235_3152 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.686 |
| EDY80859.1 | rsmG | VDG1235_476 | VDG1235_1083 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.477 |
| EDY81358.1 | EDY80859.1 | VDG1235_976 | VDG1235_476 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.968 |
| EDY81358.1 | EDY83525.1 | VDG1235_976 | VDG1235_3152 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Hypothetical protein. | 0.686 |
| EDY81358.1 | rsmG | VDG1235_976 | VDG1235_1083 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.476 |
| EDY83525.1 | EDY80859.1 | VDG1235_3152 | VDG1235_476 | Hypothetical protein. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.686 |
| EDY83525.1 | EDY81358.1 | VDG1235_3152 | VDG1235_976 | Hypothetical protein. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.686 |
| EDY83525.1 | rsmG | VDG1235_3152 | VDG1235_1083 | Hypothetical protein. | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.530 |
| rsmG | EDY80859.1 | VDG1235_1083 | VDG1235_476 | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.477 |
| rsmG | EDY81358.1 | VDG1235_1083 | VDG1235_976 | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.476 |
| rsmG | EDY83525.1 | VDG1235_1083 | VDG1235_3152 | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | Hypothetical protein. | 0.530 |