STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83556.1[C] COG0584 Glycerophosphoryl diester phosphodiesterase. (298 aa)    
Predicted Functional Partners:
EDY85153.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; [I] COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.687
EDY82603.1
Alkaline phosphatase family protein, putative; [P] COG1785 Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.678
EDY82356.1
Bacterial extracellular solute-binding protein, putative; [G] COG1653 ABC-type sugar transport system, periplasmic component.
 
  
 0.643
EDY85163.1
Transporter, major facilitator family, putative; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.643
EDY80837.1
FGGY family of carbohydrate kinase, N-terminal domain protein; [C] COG0554 Glycerol kinase.
 
  
 0.636
EDY83777.1
FGGY family of carbohydrate kinase, C-terminal domain protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.634
EDY83039.1
Hypothetical protein.
    
 0.627
EDY80449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
   
 
 0.601
EDY82032.1
Type I phosphodiesterase / nucleotide pyrophosphatase superfamily; [R] COG1524 Uncharacterized proteins of the AP superfamily.
  
 
 0.592
EDY82369.1
FAD dependent oxidoreductase domain protein; [C] COG0578 Glycerol-3-phosphate dehydrogenase.
 
 
 0.569
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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