STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83628.1BNR/Asp-box repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (336 aa)    
Predicted Functional Partners:
EDY83106.1
Hypothetical protein.
    
  0.804
EDY83145.1
BNR/Asp-box repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.715
EDY82595.1
Peptidase family S51; [E] COG3340 Peptidase E; Belongs to the peptidase S51 family.
       0.678
EDY83166.1
Hypothetical protein; [G] COG1820 N-acetylglucosamine-6-phosphate deacetylase.
       0.678
EDY85083.1
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase superfamily; [G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase.
       0.678
EDY82978.1
Hypothetical protein.
 
     0.521
EDY81415.1
Oxidoreductase, zinc-binding dehydrogenase family; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; overlaps another CDS with the same product name.
       0.426
EDY84489.1
Oxidoreductase, zinc-binding dehydrogenase family; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; overlaps another CDS with the same product name.
       0.426
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.