STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83670.1GSPII_E N-terminal domain family; [NU] COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. (571 aa)    
Predicted Functional Partners:
EDY82626.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
 
 0.920
EDY82630.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
 
 0.920
EDY83781.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
 
 0.920
EDY80853.1
Bacterial type II secretion system protein F domain; [NU] COG1459 Type II secretory pathway, component PulF.
 
 
 0.896
EDY82296.1
Bacterial Peptidase A24 N-terminal domain family; [NOU] COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
 
 0.872
EDY84916.1
Hypothetical protein.
       0.789
EDY83693.1
General secretion pathway protein G; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
  
  0.744
EDY84585.1
Bacterial type II and III secretion system protein; [NU] COG1450 Type II secretory pathway, component PulD.
 
  
 0.705
EDY85280.1
Prokaryotic N-terminal methylation motif domain protein; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
  
  0.668
EDY85058.1
Hypothetical protein.
       0.651
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.