STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83759.1Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins. (449 aa)    
Predicted Functional Partners:
EDY82853.1
AP endonuclease, family 2; [G] COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.802
EDY81522.1
AP endonuclease, family 2; [G] COG1082 Sugar phosphate isomerases/epimerases.
  
 
  0.796
EDY80669.1
Conserved domain protein.
  
     0.730
EDY81244.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
  
     0.711
EDY84354.1
Conserved domain protein.
  
     0.709
EDY81684.1
Conserved domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.706
EDY81750.1
Conserved domain protein.
  
     0.706
EDY83189.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
     0.695
EDY82406.1
Conserved domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.679
EDY81285.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
  
     0.670
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.