STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY83906.1Glycosyl hydrolase family 3 C terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases. (730 aa)    
Predicted Functional Partners:
EDY83621.1
Glycosyl hydrolase family 3 N terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.780
EDY80514.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.755
EDY82466.1
Glycosyl hydrolase family 10 protein; [G] COG3693 Beta-1,4-xylanase.
 
 
 0.746
EDY83284.1
Glycosyl hydrolase family 10 protein; [G] COG3693 Beta-1,4-xylanase.
 
 
 0.735
EDY82501.1
Glycosyl hydrolase family 1; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
    
 0.709
EDY81304.1
Glycosyl hydrolase family 1; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
    
 0.709
EDY81608.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.693
EDY85166.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.626
EDY85210.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.625
EDY83646.1
Hypothetical protein.
       0.610
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.