STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80738.1LytTr DNA-binding domain family; [KT] COG3279 Response regulator of the LytR/AlgR family. (253 aa)    
Predicted Functional Partners:
EDY82739.1
Histidine kinase family; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 0.978
EDY84514.1
Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.909
EDY82618.1
Histidine kinase family; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 0.908
EDY81327.1
Histidine kinase family; [T] COG3275 Putative regulator of cell autolysis.
 0.908
EDY83503.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
  
 0.786
EDY82789.1
Putative acyltransferase, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.773
EDY84549.1
Two component regulator three Y motif family; [T] COG0642 Signal transduction histidine kinase.
 
  
  0.763
EDY84714.1
Hypothetical protein; [T] COG0784 FOG: CheY-like receiver; response regulator receiver domain, putative.
    
 0.757
EDY84545.1
Two component regulator three Y motif family; [T] COG0642 Signal transduction histidine kinase.
 
  
  0.752
EDY80449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
    
 0.750
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.