STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84019.1Bacterial transferase hexapeptide repeat protein; [R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (177 aa)    
Predicted Functional Partners:
EDY83602.1
[P] COG0288 Carbonic anhydrase.
    
 0.871
EDY83688.1
[P] COG0288 Carbonic anhydrase.
    
 0.871
EDY83247.1
Amidohydrolase family; [R] COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
       0.773
EDY84636.1
Hypothetical protein.
       0.773
EDY83162.1
Glyoxalase family protein; [E] COG0346 Lactoylglutathione lyase and related lyases.
 
 
    0.725
EDY81978.1
Serine O-acetyltransferase, putative; [E] COG1045 Serine acetyltransferase.
    
 0.478
EDY84113.1
Hypothetical protein; [R] COG3044 Predicted ATPase of the ABC class.
       0.442
EDY81452.1
Glycosyl transferase family 8.
       0.433
EDY82172.1
8-oxoguanine DNA glycosylase, N-terminal domain family; [L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
       0.433
folE2
Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
  
 0.433
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.