Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDY80634.1 | EDY84085.1 | VDG1235_250 | VDG1235_3714 | Glyceraldehyde-3-phosphate dehydrogenase, type I; [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | 0.606 |
| EDY80634.1 | EDY85262.1 | VDG1235_250 | VDG1235_4897 | Glyceraldehyde-3-phosphate dehydrogenase, type I; [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.673 |
| EDY84085.1 | EDY80634.1 | VDG1235_3714 | VDG1235_250 | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | Glyceraldehyde-3-phosphate dehydrogenase, type I; [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.606 |
| EDY84085.1 | EDY84334.1 | VDG1235_3714 | VDG1235_3965 | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | PAS fold family; [T] COG0642 Signal transduction histidine kinase. | 0.438 |
| EDY84085.1 | EDY84804.1 | VDG1235_3714 | VDG1235_4437 | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | Hypothetical protein; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); STAS domain, putative. | 0.518 |
| EDY84085.1 | EDY85262.1 | VDG1235_3714 | VDG1235_4897 | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.586 |
| EDY84334.1 | EDY84085.1 | VDG1235_3965 | VDG1235_3714 | PAS fold family; [T] COG0642 Signal transduction histidine kinase. | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | 0.438 |
| EDY84334.1 | EDY84804.1 | VDG1235_3965 | VDG1235_4437 | PAS fold family; [T] COG0642 Signal transduction histidine kinase. | Hypothetical protein; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); STAS domain, putative. | 0.940 |
| EDY84334.1 | EDY85262.1 | VDG1235_3965 | VDG1235_4897 | PAS fold family; [T] COG0642 Signal transduction histidine kinase. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.454 |
| EDY84804.1 | EDY84085.1 | VDG1235_4437 | VDG1235_3714 | Hypothetical protein; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); STAS domain, putative. | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | 0.518 |
| EDY84804.1 | EDY84334.1 | VDG1235_4437 | VDG1235_3965 | Hypothetical protein; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); STAS domain, putative. | PAS fold family; [T] COG0642 Signal transduction histidine kinase. | 0.940 |
| EDY85262.1 | EDY80634.1 | VDG1235_4897 | VDG1235_250 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Glyceraldehyde-3-phosphate dehydrogenase, type I; [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.673 |
| EDY85262.1 | EDY84085.1 | VDG1235_4897 | VDG1235_3714 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump. | 0.586 |
| EDY85262.1 | EDY84334.1 | VDG1235_4897 | VDG1235_3965 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PAS fold family; [T] COG0642 Signal transduction histidine kinase. | 0.454 |